| Year | Champion |
| 1997-98 | HNK Cibalia |
| 1998-99 | HNK Vukovar 91 |
| 1999-00 | NK Marsonia |
| 2000-01 | NK Kamen Ingrad |
| 2001-02 | HNK Vukovar 91 |
| 2001-02 | NK Istra |
| 2002-03 | NK Marsonia |
| 2003-04 | NK Međimurje Čakovec |
| 2003-04 | Istra 1961 Pula |
| 2004-05 | NK Novalja |
| 2005-06 | HNK Šibenik |
| 2006-07 | Inter Zaprešić |
| 2007-08 | NK Croatia Sesvete |
| 2009-10 | RNK Split |
| 2011-12 | NK Dugopolje |
| 2012-13 | Hrvatski Dragovoljac |
| 2013-14 | NK Zagreb |
| 2014-15 | Inter Zaprešić |
| 2015-16 | HNK Cibalia |
| 2016-17 | NK Rudeš |
| 2017-18 | HNK Gorica |
| 2018-19 | NK Varaždin |
| 2019-20 | HNK Šibenik |
| 2020-21 | Hrvatski Dragovoljac |
| 2021-22 | NK Varaždin |