| Year | Champion |
| 2000-01A | Toluca |
| 2001-02A | Pachuca |
| 2002-03A | Toluca |
| 2002-03C | Monterrey |
| 2003-04A | Pachuca |
| 2004-05A | Pumas UNAM |
| 2004-05C | América |
| 2005-06A | Toluca |
| 2005-06C | Pachuca |
| 2006-07A | Chivas Guadalajara |
| 2006-07C | Pachuca |
| 2007-08A | Atlante |
| 2007-08C | Santos Laguna |
| 2008-09A | Toluca |
| 2008-09C | Pumas UNAM |
| 2009-10A | Monterrey |
| 2009-10C | Toluca |
| 2010-11A | Monterrey |
| 2010-11C | Pumas UNAM |
| 2011-12A | Tigres |
| 2011-12C | Santos Laguna |
| 2012-13A | Tijuana |
| 2012-13C | América |
| 2013-14A | León |
| 2013-14C | León |