| # | Estonian Esiliiga | G | W | D | L | GF | GA | Pts | +- | ||
| - | FC Levadia Tallinna II | 36 | 22 | 6 | 8 | 83 | 33 | 72 | 50 | ||
| ^ | FC Kuressaare | 36 | 20 | 9 | 7 | 67 | 35 | 69 | 32 | Promoted | |
| - | FC Flora Tallinn II | 36 | 18 | 8 | 10 | 62 | 41 | 62 | 21 | ||
| Paide linnameeskond | 36 | 14 | 12 | 10 | 58 | 44 | 54 | 14 | Promoted | ||
| - | FC Valga | 36 | 14 | 9 | 13 | 46 | 54 | 51 | -8 | ||
| - | Kiviõli FC Irbis | 36 | 11 | 11 | 14 | 51 | 66 | 44 | -15 | ||
| - | Tartu JK Maag Tammeka II | 36 | 11 | 10 | 15 | 60 | 63 | 43 | -3 | ||
| - | Rakvere FC Flora | 36 | 10 | 7 | 19 | 53 | 82 | 37 | -29 | ||
| - | FC Ajax Lasnamäe | 36 | 7 | 9 | 20 | 57 | 79 | 30 | -22 | ||
| * | FC TVMK II Tallinn | 36 | 11 | 3 | 22 | 58 | 98 | 36 | -40 | Relegated |