| # | Estonian Esiliiga | G | W | D | L | GF | GA | Pts | +- | ||
| - | FC Levadia Tallinna II | 36 | 28 | 5 | 3 | 107 | 28 | 89 | 79 | ||
| - | FC Flora Tallinn II | 36 | 22 | 6 | 8 | 93 | 45 | 72 | 48 | ||
| ^ | FC Ajax Lasnamäe | 36 | 20 | 9 | 7 | 71 | 38 | 69 | 33 | Promoted | |
| - | Kiviõli FC Irbis | 36 | 17 | 6 | 13 | 85 | 72 | 57 | 13 | ||
| - | JK Tallinna Kalev* | 36 | 17 | 6 | 13 | 67 | 65 | 53 | 2 | ||
| - | Tallinna JK Legion | 36 | 11 | 6 | 19 | 57 | 81 | 39 | -24 | ||
| - | JK Vaprus Pärnu | 36 | 10 | 7 | 19 | 57 | 78 | 37 | -21 | ||
| - | FC Valga | 36 | 10 | 6 | 20 | 57 | 90 | 36 | -33 | ||
| * | Rakvere FC Flora* | 36 | 10 | 3 | 23 | 45 | 95 | 31 | -50 | Relegated | |
| * | Jõhvi JK Orbiit | 36 | 6 | 4 | 26 | 35 | 82 | 22 | -47 | Relegated |