| # | Japanese Football League | G | W | D | L | GF | GA | Pts | +- | ||
| ^ | V-Varen Nagasaki | 32 | 20 | 7 | 5 | 57 | 24 | 67 | 33 | Promoted | |
| - | Nagano Parceiro | 32 | 17 | 7 | 8 | 57 | 34 | 58 | 23 | ||
| - | Sagawa Shiga | 32 | 16 | 9 | 7 | 61 | 37 | 57 | 24 | ||
| - | Kamatamare Sanuki | 32 | 15 | 8 | 9 | 49 | 29 | 53 | 20 | ||
| - | Honda FC | 32 | 16 | 5 | 11 | 55 | 39 | 53 | 16 | ||
| - | YSCC Yokohama | 32 | 15 | 4 | 13 | 58 | 50 | 49 | 8 | ||
| - | Sagawa Printing | 32 | 12 | 9 | 11 | 43 | 43 | 45 | 0 | ||
| - | MIO Biwako Shiga | 32 | 11 | 10 | 11 | 53 | 52 | 43 | 1 | ||
| - | FC Ryukyu | 32 | 12 | 7 | 13 | 58 | 62 | 43 | -4 | ||
| - | Yokogawa Musashino | 32 | 11 | 8 | 13 | 35 | 50 | 41 | -15 | ||
| - | Shizuoka Fujieda MYFC | 32 | 11 | 7 | 14 | 39 | 48 | 40 | -9 | ||
| - | Sony Sendai | 32 | 9 | 12 | 11 | 27 | 29 | 39 | -2 | ||
| - | Blaublitz Akita | 32 | 9 | 10 | 13 | 33 | 41 | 37 | -8 | ||
| - | Zweigen Kanazawa | 32 | 8 | 12 | 12 | 33 | 41 | 36 | -8 | ||
| - | Verspah Oita | 32 | 9 | 8 | 15 | 40 | 57 | 35 | -17 | ||
| - | Honda Lock | 32 | 7 | 7 | 18 | 28 | 56 | 28 | -28 | ||
| - | Tochigi Uva | 32 | 4 | 10 | 18 | 36 | 70 | 22 | -34 |