| # | Russian National League | G | W | D | L | GF | GA | Pts | +- | ||
| ^ | Rubin Kazan | 34 | 22 | 6 | 6 | 51 | 14 | 72 | 37 | Promoted | |
| ^ | Chernomorets Novorossiysk | 34 | 20 | 10 | 4 | 59 | 29 | 70 | 30 | Promoted | |
| - | Tom Tomsk | 34 | 17 | 10 | 7 | 51 | 23 | 61 | 28 | ||
| - | Kuban Krasnodar | 34 | 15 | 9 | 10 | 44 | 30 | 54 | 14 | ||
| - | Amkar Perm | 34 | 15 | 9 | 10 | 47 | 31 | 54 | 16 | ||
| - | Spartak Nalchik | 34 | 14 | 11 | 9 | 42 | 30 | 53 | 12 | ||
| - | FK Khimki | 34 | 14 | 10 | 10 | 38 | 27 | 52 | 11 | ||
| - | Lada Togliatti | 34 | 13 | 11 | 10 | 54 | 35 | 50 | 19 | ||
| - | Lokomotiv Chita | 34 | 12 | 9 | 13 | 38 | 46 | 45 | -8 | ||
| - | Kristall Smolensk | 34 | 12 | 8 | 14 | 39 | 43 | 44 | -4 | ||
| - | Gazovik Gazprom Izhevsk | 34 | 10 | 14 | 10 | 34 | 32 | 44 | 2 | ||
| - | SKA-Energy Khabarovsk | 34 | 10 | 12 | 12 | 35 | 37 | 42 | -2 | ||
| - | Fakel Voronezh | 34 | 10 | 10 | 14 | 34 | 42 | 40 | -8 | ||
| - | Neftekhimik Nizhnekamsk | 34 | 11 | 5 | 18 | 34 | 49 | 38 | -15 | ||
| - | Volgar Astrakhan | 34 | 10 | 6 | 18 | 34 | 51 | 36 | -17 | ||
| - | Dinamo Sankt-Peterburg | 34 | 9 | 9 | 16 | 28 | 56 | 36 | -28 | ||
| * | SKA Rostov-na-Donu | 34 | 8 | 7 | 19 | 38 | 62 | 31 | -24 | Relegated | |
| * | Metallurg Krasnoyarsk* | 34 | 4 | 4 | 26 | 24 | 87 | -8 | -63 | Relegated |