| Team | FC Flo | FC Inf | FC Lev | FC Loo | FC Puu | JK Tam | Kiviõ | Pärnu | Rakver | Tartu | Sum | Avg |
| FC Flora Tallinn II | 0 | 4 | 89 | 2 | 102 | 78 | 73 | 57 | 102 | 507 | 56 | |
| FC Infonet | 0 | 4 | 89 | 2 | 101 | 78 | 73 | 57 | 101 | 505 | 56 | |
| FC Levadia Tallinna II | 4 | 4 | 86 | 4 | 101 | 76 | 76 | 55 | 101 | 507 | 56 | |
| FC Lootus Kohtla-Järve | 89 | 89 | 86 | 90 | 74 | 11 | 121 | 32 | 74 | 666 | 74 | |
| FC Puuma | 2 | 2 | 4 | 90 | 104 | 80 | 74 | 59 | 104 | 519 | 57 | |
| JK Tammeka Tartu II | 102 | 101 | 101 | 74 | 104 | 69 | 80 | 69 | 0 | 700 | 77 | |
| Kiviõli FC Irbis | 78 | 78 | 76 | 11 | 80 | 69 | 111 | 21 | 69 | 593 | 65 | |
| Pärnu linnameeskond | 73 | 73 | 76 | 121 | 74 | 80 | 111 | 94 | 80 | 782 | 86 | |
| Rakvere JK Tarvas | 57 | 57 | 55 | 32 | 59 | 69 | 21 | 94 | 69 | 513 | 57 | |
| Tartu SK 10 | 102 | 101 | 101 | 74 | 104 | 0 | 69 | 80 | 69 | 700 | 77 |