The all-time table uses three points for a win and one point for a draw, and does not consider point deductions

Rank	Team	Seasons	G	W	D	L	GF	GA	Pts	Pts/Game	+-	+-/game	Champions	Relegated
1	ŠK Slovan Bratislava	18	591	320	145	126	1025	567	1105	1.8697	458	0.7750	8	1
2	MŠK Žilina	19	631	292	150	189	966	666	1026	1.6260	300	0.4754	5	1
3	FC Spartak Trnava	19	627	283	153	191	896	690	1002	1.5981	206	0.3285	0	1
4	MFK Košice	17	555	220	135	200	761	716	795	1.4324	45	0.0811	2	1
5	MFK Ružomberok	16	537	211	142	184	689	663	775	1.4432	26	0.0484	1	0
6	FK Dukla Banská Bystrica	17	555	186	153	216	672	683	711	1.2811	-11	-0.0198	0	1
7	Inter Bratislava	13	432	197	95	140	652	517	686	1.5880	135	0.3125	2	0
8	FC Petržalka 1898	13	435	187	109	139	609	523	670	1.5402	86	0.1977	2	1
9	AS Trencín	13	438	165	102	171	573	593	597	1.3630	-20	-0.0457	0	1
10	1.FC Tatran Prešov	14	453	140	122	191	490	615	542	1.1965	-125	-0.2759	0	2
11	FC Nitra	13	421	128	86	207	436	619	470	1.1164	-183	-0.4347	0	4
12	MFK Dubnica nad Váhom	12	402	113	110	179	412	569	449	1.1169	-157	-0.3905	0	3
13	FK DAC Dunajská Streda	11	351	94	81	176	357	568	363	1.0342	-211	-0.6011	0	3
14	FK Púchov	6	216	70	53	93	235	294	263	1.2176	-59	-0.2731	0	1
15	FK Senica	5	165	74	40	51	220	178	262	1.5879	42	0.2545	0	0
16	HFC Humenné	7	216	71	43	102	238	323	256	1.1852	-85	-0.3935	0	1
17	FC Baník Horná Nitra	7	216	59	44	113	239	369	221	1.0231	-130	-0.6019	0	1
18	FC ViOn Zlaté Moravce	6	198	56	46	96	190	293	214	1.0808	-103	-0.5202	0	1
19	Lokomotiva Kosice	5	156	48	37	71	180	241	181	1.1603	-61	-0.3910	0	1
20	Partizán Bardejov	5	154	45	24	85	159	232	159	1.0325	-73	-0.4740	0	1
21	MŠK Rimavská Sobota	4	126	35	29	62	129	193	134	1.0635	-64	-0.5079	0	2
22	Spartak Myjava	2	66	26	15	25	88	91	93	1.4091	-3	-0.0455	0	0
23	FC Senec	2	63	15	20	28	63	87	65	1.0317	-24	-0.3810	0	1